Fig. 1
From: Epigenome profiling reveals distinctive regulatory features and cis-regulatory elements in pepper
Epigenome profiling of pepper. a Circos plot illustrating epigenetic features across the chromosomes. b Distribution of the epigenetic features in the functional genome. c Chromatin states classified according to the epigenetic features using a multivariate HMM. d Distribution of each chromatin state in the functional genome. e Expression levels of each chromatin state. f Distance of each chromatin state to their proximal TSS. g Percentage of TEs in each chromatin state. h–j CG (h), CHG (i), and CHH (j) methylation levels in each chromatin state. The H3K27me3 and H3K9me2 ChIP-seq data are adopted from Liao et al. (2023)