Table 6 Variant effects in Oncopig hepatocellular carcinoma model stratified by variant type and level of impact
From: Development of a whole-exome sequencing kit to facilitate porcine biomedical research
|  | Number of effects associated with SNVs | Number of effects associated with INDELs | Number of total genes impacted (SNVs + INDELs) |
|---|---|---|---|
Total | 29,088 | 1350 | 7958 |
High impact | 547 | 134 | 256 |
Moderate impact | 6257 | 84 | 2189 |
Low impact | 3144 | 8 | 1168 |
Modifier | 19,140 | 1124 | 6077 |
Missense | 6262 | 0 | 2168 |
Nonsense | 530 | 0 | 201 |