Fig. 3
From: SpaNorm: spatially-aware normalization for spatial transcriptomics data
A Sub-structures of the mouse hippocampus. B Expression of 5 spatially variable genes (SVGs) in Xenium Mouse Brain dataset (replicate 1) under differently normalized data. Prox1 differentiates the dentate gyrus (DG-sg) from pyramidal layers in CA1–3 (Neurod6). Wfs1, Necab2, and Slit2 are enriched in CA1-sp, CA2-sp, and CA3-sp regions, respectively. C t-statistic from three replicates for comparing expression inside vs outside the regions. Higher statistic means stronger spatial signals