Fig. 5
From: stDyer enables spatial domain clustering with dynamic graph embedding
The performance of stDyer on a mouse cortex dataset from osmFISH. a Visualization and ARI scores of different methods for spatial domain clustering. stDyer (KNN): stDyer with a KNN spatial graph. b The Silhouette scores for the 6 methods that provide unit embeddings. c UMAP visualization by labeling units with the annotated spatial domains