Table 1 Uniquely mappable positions that pass the human-chimp divergence filter for each euchromatic sequence class of the non-recombining portion of the Y chromosome
From: Resolving the source of branch length variation in the Y chromosome phylogeny
Sequence class | Uniquely mappable | Human-chimp aligned | Retained after divergence filtering |
|---|---|---|---|
X-degenerate | 3,701,385 | 3,476,366 [94%] | 2,151,164 [58%] |
X-transposed | 27,214 | 0 | NA |
Ampliconic | 834,298 | 336,588 [40%] | 38,196 [5%] |
Others | 39,452 | 37,152 [94%] | 11,458 [29%] |
Total | 4,602,349 | 3,850,106 [84%] | 2,200,818 [48%] |