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Table 4 Unique LPA KIV-2 mutations within the target regions (KIV-2 exons 1 and 2 ± 100 bp) in each population. KIV-2 mutations are divided by mutation type for UK Biobank individuals (n = 199,119). Since the signature-based approach was developed and benchmarked in individuals of European ancestry, summary data are here filtered for White (n = 186,607), South Asian (n = 3465), and Black (n = 3200) ancestry. The PSVs defining the KIV-2B were not considered as mutations. The location “splicing region” was defined as within the 25 bp upstream and downstream KIV-2 exons

From: Resolving intra-repeat variation in medically relevant VNTRs from short-read sequencing data using the cardiovascular risk gene LPA as a model

 

All ancestries (n = 199,119)

White (n = 186,607)

South Asian (n = 3465)

Black (n = 3200)

KIV-2 mutations in target regions

707

692

283

294

Missense mutations

256

248

103

123

Nonsense mutations

37

35

12

10

Splicing region mutations

95

93

36

26

Splice-site mutations

8

8

3

1