Table 2 Comparison of taxonomic profile estimations.
From: Accurate and fast estimation of taxonomic profiles from metagenomic shotgun sequences
Genus | True (%) | MetaPhyler (%) | PhymmBL (%) | MEGAN (%) | WebCARMA (%) |
|---|---|---|---|---|---|
Bifidobacterium | 50.0 | 50.0 | 34.3 | 32.8 | 34.3 |
Bacteroides | 20.0 | 20.4 | 32.1 | 34.3 | 33.8 |
Staphylococcus | 10.0 | 10.2 | 9.4 | 9.1 | 8.9 |
Enterococcus | 10.0 | 10.1 | 9.0 | 7.3 | 10.4 |
Clostridium | 10.0 | 9.4 | 11.8 | 12.1 | 12.6 |
Other | 0.0 | 0.0 | 3.6 | 4.4 | 0.1 |